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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGTTATCAACTGATTCTTCTCAACATGTTCGCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaattactatctaagctcattatttatactgacataaatttaacacatttaaagtcattccaaatgtggcttaggttattatgtgttgggtagg...

Basic information

species Glycine max
transcript GLYMA09G31760.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208293601|gb|GE093505.1|GE093505
EST:     GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG                         GATGCCAACAAATACGAGCAACTTCT
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaat ... gtggttgcagGATGCCA-CAA-T-CGAGCAACTTCT
EST: gi|6724640|gb|AW309095.1|AW309095
EST:     GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG                         GATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaat ... gtggttgcagGATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: gi|23731586|gb|BU763924.1|BU763924
EST:     GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG                         GATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaat ... gtggttgcagGATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: gi|207840606|gb|GD812269.1|GD812269
EST:     CTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG                         GATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
genomic: CTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaat ... gtggttgcagGATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
EST: gi|33389673|gb|CA852880.1|CA852880
EST:     GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAG                         GATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC
genomic: GCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGgtatataaat ... gtggttgcagGATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGAC