1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAGCTCTTGACAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccccttcaacccaagtataaagtagcattttaattttaatttatacacttgtatgccaccttttttcttttccttactttctattgctagata...
species | Glycine max |
transcript | GLYMA09G01370.4 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGG TTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|207836097|gb|GD808754.1|GD808754
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGG TTTTTCGCAGAATATAACACTEST: gi|208082045|gb|GD883411.1|GD883411
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACT
EST: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGG TTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTEST: gi|254314656|gb|GR829649.1|GR829649
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTT
EST: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGG TTTTTCGCAGAEST: gi|15203298|gb|BI426066.1|BI426066
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGA
EST: CAAGACATAAATCTACTGTAGCTGAATTCCTATCCAAGAATTATGAATGG TTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|254314657|gb|GR829650.1|GR829650
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: AAGACATAAATCTACTGTGGCTGACATT-CTTTCCAAGAATTATGAATGG TTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAEST: gi|21887763|gb|BQ740976.1|BQ740976
genomic: AAGACATAAATCTACTGTGGCTGA-ATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
EST: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGG TTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
genomic: CAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccc ... ctgctttcagTTTTTCGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTCTTGACAAGACATAAATCTACTGTGGCTGAATTCCTTTCCAAGAATTATGAATGGgtaggttccccttcaacccaagtataaagtagcattttaattttaatttatacacttgtatgccaccttttttcttttccttactttctattgctagata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttcccct