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GCTACTATTGTTGGACCTGGAAATGAATTGGGAAAACCTGTGGATATTAACAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttccaattcaatctctctctctctctctctctcttgttatgttatggtgctcaacaagtgatgctttatttgaattgtatttggcag
species | Glycine max |
transcript | GLYMA09G01270.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTEST: gi|151405820|gb|EV275635.1|EV275635
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCT
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTTCTTGGCEST: gi|193724130|gb|FK656410.1|FK656410
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTT-CTTGGC
EST: GGACTTGTTCTGATGAATGTACTTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGCEST: gi|6567242|gb|AW234853.1|AW234853
genomic: GGACTTGTTCTGATGAATG-AC-TGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGC
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGCAEST: gi|213601975|gb|DB976222.1|DB976222
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGCA
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGCAEST: gi|151410471|gb|EV280286.1|EV280286
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCTTGGTCCATTTCTTGGCA
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGA-TGACTGGAGTG CTCGAGATAT-CAG-CATGGGAEST: gi|208203370|gb|GD998810.1|GD998810
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGA
EST: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTG CTCGAGATATTCAGGCATGGGAATATATTCCTCTEST: gi|192327116|gb|FK015508.1|FK015508
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTCCTCT
EST: CA-TGCTAAAGATCACATCTTTGGACTTGTTCTGATGA-TGACTG-A-TG CTCGAGATAT-CAG-CATGG-A-TATATTC
genomic: CAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttcca ... tatttggcagCTCGAGATATTCAGGCATGGGAATATATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTACTATTGTTGGACCTGGAAATGAATTGGGAAAACCTGTGGATATTAACAATGCTAAAGATCACATCTTTGGACTTGTTCTGATGAATGACTGGAGTGgtagtttccaattcaatctctctctctctctctctctcttgttatgttatggtgctcaacaagtgatgctttatttgaattgtatttggcag
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