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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTCTGCTCATCATAATGAGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaattgttatttgttattgatttatattttgatctctaaatttttaatattcatttaacctgtatgcaaactacttgtttag

Basic information

species Glycine max
transcript GLYMA08G28320.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151406729|gb|EV276544.1|EV276544
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|10253404|gb|BE821170.1|BE821170
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|13789330|gb|BG651921.1|BG651921
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|151396331|gb|EV266208.1|EV266208
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|51342958|gb|CO983700.1|CO983700
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|151412110|gb|EV281922.1|EV281922
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
EST: gi|58018455|gb|CX705197.1|CX705197
EST:     AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAG                         GTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT
genomic: AGTCGGACAAATTACCTAGAGGTGGCCTTGATAAAATGACATTGATTGAGgtccgaaaat ... acttgtttagGTTGGTCCGCGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTT