1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TCAGCTGATGATTTACGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttcactattgtatttttatgctgtgctgaaaatgttctctgttgataacttggtataatttatccatttaaagggcaaaaacatatatacagt...
species | Glycine max |
transcript | GLYMA08G20830.3 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATEST: gi|193636366|gb|FK584039.1|FK584039
genomic: GCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
EST: AAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATEST: gi|14990248|gb|BI315921.1|BI315921
genomic: AAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
EST: TTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATEST: gi|208216614|gb|GE012546.1|GE012546
genomic: TTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
EST: AGTTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATEST: gi|7796415|gb|AW781812.1|AW781812
genomic: AG-TTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
EST: AAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATEST: gi|193687174|gb|FK630415.1|FK630415
genomic: AAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
EST: TAAAGCCAGCAAATATGGAGGATCTGACCG AGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
genomic: TAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttc ... attattgcagAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCTGATGATTTACGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACCGgtaagttttcactattgtatttttatgctgtgctgaaaatgttctctgttgataacttggtataatttatccatttaaagggcaaaaacatatatacagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT