1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGAGGTCAATTGGCTGGACTGATAAGGTCTACGAATTTATGCGTTCAAAGAAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttgatcatattctgcagtgctttatgcacagccattaatattacacacaaacatgtctgttccacaattttgtgaatattatcatatactgttt...
species | Glycine max |
transcript | GLYMA08G18720.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATEST: gi|51337923|gb|CO981789.1|CO981789
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAAT
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGAEST: gi|26058126|gb|CA801040.1|CA801040
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGAEST: gi|193311200|gb|FK276426.1|FK276426
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGEST: gi|254317312|gb|GR826257.1|GR826257
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGG
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGAEST: gi|51345019|gb|CO985752.1|CO985752
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGAEST: gi|192329428|gb|FK022176.1|FK022176
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
EST: AATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGAEST: gi|254317311|gb|GR826256.1|GR826256
genomic: AATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
EST: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAG GAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
genomic: AAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttga ... tgtgatgcagGAAGTTGTTAATAGGAGATGCGCAGGGAGCTTTCATATCCAAGATTCCCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGTCAATTGGCTGGACTGATAAGGTCTACGAATTTATGCGTTCAAAGAAGTTACGTGCACAAGAAGCTGGAAATTTGACAAATGGAGATGAAATAAGgtaaggttgatcatattctgcagtgctttatgcacagccattaatattacacacaaacatgtctgttccacaattttgtgaatattatcatatactgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG