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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATTTTTCTACAGCTAATATGATAGGAGGGAAAGGTTTGAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGgtaatgaaactgggctgctacttttttatttgcccattttgaatgtcataatcctcatactgagcatgagttggttattacttatatgtatgtattgatc...

Basic information

species Glycine max
transcript GLYMA08G13960.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G13960.1 (Glycine max), 5'ss of exon 7
lower sequence: GRMZM2G028307_T01 (Zea mays), 5'ss of exon 7
GGATTTTTCTACAGCTAATATGATAGGAGGGAAAGGTTTGAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGgta--atgaaactgggctgctacttttttatttgcccattttgaatgtcataatcc--tcatactgagcat-gagttggttattacttatatgtatgtattgatc
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TTCCTTCGCTACTGCTAAGAAGATTGGGGCCACTGGGTTGCGAGGAAGATCTTGGCCAGACTTAGACATGCTTCCATTTGGATGGCTTACTGATCCAAgtatgatttaactctacgttaagaaataaaattaatcttgattgttgtctggatctaatgacttttaacattgaataaaattttcacaatattcaggaga-----