1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTATTAAGTATGTTCCAGTTCCCATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaactagctaaatattttacattttgagatattgtgtattgtgtacctttgctagttcagttgaggtatgagcttttgaaaaattgaatggattgtgaa...
species | Glycine max |
transcript | GLYMA08G07720.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTEST: gi|4298193|gb|AI442726.1|AI442726
genomic: TTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaactagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
EST: TCTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GCATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
genomic: TTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaactagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTAAGTATGTTCCAGTTCCCATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaactagctaaatattttacattttgagatattgtgtattgtgtacctttgctagttcagttgaggtatgagcttttgaaaaattgaatggattgtgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC