1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGGTACATCATAAAAGATGTGTCAAATGCAAATTTTAGGCACATTATACTAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatattgtttttcggttccgcagttcctttaccaatgtagatttgacaagtctgcccaacctataaacacttaacattaatttttgagtaagttt...
species | Glycine max |
transcript | GLYMA07G36110.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAG ATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCATEST: gi|22523790|gb|BU082601.1|BU082601
genomic: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatat ... tcttgtgcagATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCAT
EST: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAG ATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCATEST: gi|22523842|gb|BU082653.1|BU082653
genomic: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatat ... tcttgtgcagATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCAT
EST: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAG ATAATGTATAGTAAAGGTTTGGAAATGCTTAANATATTCAAAAACCATCATEST: gi|163923471|gb|EH038361.1|EH038361
genomic: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatat ... tcttgtgcagATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCAT
EST: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAG ATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCAT
genomic: TAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatat ... tcttgtgcagATAATGTATAGTAAAGGTTTGGAAATGCTTAAAATATTCAAAAACCATCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGTACATCATAAAAGATGTGTCAAATGCAAATTTTAGGCACATTATACTAGAGAACAATGAGAACAAACCTGTTACTAATAGCAGAGACACACAAGAGgtatgtatattgtttttcggttccgcagttcctttaccaatgtagatttgacaagtctgcccaacctataaacacttaacattaatttttgagtaagttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccaacc