1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTTCGGTGCAGGAAACTATGCAATGTGTGGTCGTGCCTATAGTCCCAACTTCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataattctcataactcatgattatttacaagaaagtattggcattagtagatccagaacatcgctcttcttggttattgttctgtactgtgtgag...
species | Glycine max |
transcript | GLYMA07G33620.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: -TGTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAG GCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGAEST: gi|254348110|gb|GR851789.1|GR851789
genomic: CT-TGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataat ... tgatcatcagGCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGA
EST: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAG GCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGAEST: gi|18735396|gb|BM528741.1|BM528741
genomic: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataat ... tgatcatcagGCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGA
EST: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAG GCTGCTGGTGTGCTGGCEST: gi|209717947|gb|BW666140.1|BW666140
genomic: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataat ... tgatcatcagGCTGCTGGTGTGCTGGC
EST: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAG GCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGAEST: gi|7795135|gb|AW780532.1|AW780532
genomic: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataat ... tgatcatcagGCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGA
EST: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAG GCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGA
genomic: TCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataat ... tgatcatcagGCTGCTGGTGTGCTGGCCCAAATAGAGAAAGGCAACAAGAAAAGGCAAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCGGTGCAGGAAACTATGCAATGTGTGGTCGTGCCTATAGTCCCAACTTCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTAATGGGTGGTGCTCAGgttgtataattctcataactcatgattatttacaagaaagtattggcattagtagatccagaacatcgctcttcttggttattgttctgtactgtgtgag
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