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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACCTTTTGCCTTTTATATGGGGTTCATACCAAATTTTGGACGGCTAGGATCTTGGAATGTGATCATGTTTTTAACTCTAGAACAGgtacaagttgaatactttgtgatagctttccatttttcctatcttattatcttatcaagtatctcatggagttctactttatttaccatacttgtctgct...

Basic information

species Glycine max
transcript GLYMA07G17380.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA07G17380.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv08s0007g01700.t01 (Vitis vinifera), 5'ss of exon 8
GGACCTTTTGCCTTTTATATGGGGTTCATACCAAATTTTGGACGGCTAGGATCTTGGAATGTGATCATGTTTTTAACTCTAGAACAGgtacaagttgaatactttgtgatagctttccatttttccta--tcttattatcttatcaagtatctcatggagttctactttatttaccatacttgtctgct
|| ||| ||||||| || | ||| || |||||||||||||||||||| ||||||||||| || ||||||||| | ||  | |||||||||||  || || | | |||||||   ||       |  ||  | || |  ||||     | |  |  ||| |     ||||      |||       ||  
GGGCCTCTTGCCTTCTACAAGGGTTTTATACCAAATTTTGGACGGCTGGGATCTTGGAACGTCATCATGTTTCTGACCTTGGAACAGgtacagtttcaa-attgtgtgatactcttatgccccttttaattgttctggtcttgctttgcacatggtggtgcatggctttcaacttcatttccagatgt-