1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgcttttcattggatccatttaaaagggtttagggattttgcattctcagagaagccaccagttaaacttacatttcttttattaaatgaaaaaaaa...
species | Glycine max |
transcript | GLYMA07G09180.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGEST: gi|19348059|gb|BM892591.1|BM892591
genomic: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
EST: GTTCAAGGAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGEST: gi|16345287|gb|BI970882.1|BI970882
genomic: G---A-G-AGA-A-GACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
EST: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGEST: gi|19348345|gb|BM892877.1|BM892877
genomic: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
EST: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGEST: gi|31464669|gb|CD406682.1|CD406682
genomic: GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
EST: GTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGEST: gi|120493651|gb|EH221818.1|EH221818
genomic: GTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
EST: GTTCAAGGAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAG CTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
genomic: G---A-G-AGA-A-GACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgctttt ... tctggtgtagCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGgtatgcttttcattggatccatttaaaagggtttagggattttgcattctcagagaagccaccagttaaacttacatttcttttattaaatgaaaaaaaa
- - - - - - - - - - CTGAAG
- - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaaaa