1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTTTTCTCCTTGTATCATTTCAGACACCATCAACATGGAAGGTGGCAGGCCCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttatagaccctatctccctgttgcctttgttttaagcttccattttcccttgttaataatcaatatttcctccctttattcatgtatgatagtg...
species | Glycine max |
transcript | GLYMA07G04260.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTA GCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAEST: gi|298188304|gb|HO034997.1|HO034997
genomic: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttat ... aattgtgtagGCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCA
EST: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTA GCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAEST: gi|42722617|gb|CK768516.1|CK768516
genomic: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttat ... aattgtgtagGCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCA
EST: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTA GCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAEST: gi|46492946|gb|CN472502.1|CN472502
genomic: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttat ... aattgtgtagGCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCA
EST: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTA GCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCA
genomic: CCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttat ... aattgtgtagGCACACAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTTCTCCTTGTATCATTTCAGACACCATCAACATGGAAGGTGGCAGGCCCGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAgtaagtttatagaccctatctccctgttgcctttgttttaagcttccattttcccttgttaataatcaatatttcctccctttattcatgtatgatagtg
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