1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGATGTTTCTTTGGATAATTTGCGCCCAAGTCCTTCAGCCAGATGTAGAAGAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagacactagtataataagaatgtaatacttgtatactgccaagagtaagattatcatctaattataaattatctaatatgataaattgtaattag...
species | Glycine max |
transcript | GLYMA06G46000.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAG GTCACATGGGTTGAGCAEST: gi|193727711|gb|FK664509.1|FK664509
genomic: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagaca ... gtattattagGTCACATGGGTTGAGCA
EST: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAG GTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCACAATCTTEST: gi|193624296|gb|FK573392.1|FK573392
genomic: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagaca ... gtattattagGTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCACAATCTT
EST: CCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAG GTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCACAATCTTEST: gi|193484236|gb|FK448562.1|FK448562
genomic: CCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagaca ... gtattattagGTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCACAATCTT
EST: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAG GTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTT
genomic: GAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagaca ... gtattattagGTCACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGTTTCTTTGGATAATTTGCGCCCAAGTCCTTCAGCCAGATGTAGAAGAAGGCCTTCTGGCTGCCTAATTCAAGAAATGCCAAATGGCTATTCAAAGgtacgagacactagtataataagaatgtaatacttgtatactgccaagagtaagattatcatctaattataaattatctaatatgataaattgtaattag
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