1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGGGTGAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagtttttctgttctatgcattattgtgcctgtttatatattttattattttttggggatgctttgaagcagcaacttgctatcatatggtaagggag...
species | Glycine max |
transcript | GLYMA06G19250.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|10253112|gb|BE820878.1|BE820878
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|11687638|gb|BF595314.1|BF595314
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|22522844|gb|BU081655.1|BU081655
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|261497053|gb|GT185228.1|GT185228
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTTTGTGGGTEST: gi|11687750|gb|BF595426.1|BF595426
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|13789795|gb|BG652386.1|BG652386
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|51337755|gb|CO981621.1|CO981621
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|254322816|gb|GR839837.1|GR839837
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|8404251|gb|BE059885.1|BE059885
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|6725472|gb|AW309871.1|AW309871
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTEST: gi|208032805|gb|GD830464.1|GD830464
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
EST: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAA GTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
genomic: TTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagttttt ... gggcctgcagGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGTGAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAgtgagtttttctgttctatgcattattgtgcctgtttatatattttattattttttggggatgctttgaagcagcaacttgctatcatatggtaagggag
- - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - GCTGCT