1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttattatatgtatgcttttagagaatgaattgcttttgctcacttgaaaagttgttgcttctggtaaaataaattagccaatacagaagttgta...
species | Glycine max |
transcript | GLYMA06G15870.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACAT ATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATGEST: gi|4313459|gb|AI460578.1|AI460578
genomic: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttat ... tctgaaacagATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATG
EST: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACAT ATAAATTCTTCTTCCTCCATGCTATCTTTCANAGGGAGTCCATACTGGATGEST: gi|24136233|gb|BU926743.1|BU926743
genomic: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttat ... tctgaaacagATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATG
EST: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACAT ATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATGEST: gi|9203893|gb|BE330117.1|BE330117
genomic: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttat ... tctgaaacagATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATG
EST: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACAT ATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATG
genomic: TTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttat ... tctgaaacagATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATgtaagtttattatatgtatgcttttagagaatgaattgcttttgctcacttgaaaagttgttgcttctggtaaaataaattagccaatacagaagttgta
- - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaataaa