1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGTTTGGTAGTGTTCTCTTTGGAGTCCTTGGCATGCCAATTGCAGCAGCTCTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgttgctcgttctctgttctcacacataaatcaagggtcttgtttgctcctagcctctttaaaaagatgcctattaaacctacaagagttttat...
species | Glycine max |
transcript | GLYMA06G04900.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAG TTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAAEST: gi|6747406|gb|AW317862.1|AW317862
genomic: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgtt ... gattatgcagTTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAA
EST: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAG TTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAAEST: gi|7590513|gb|AW706264.1|AW706264
genomic: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgtt ... gattatgcagTTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAA
EST: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAG TTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAAEST: gi|7692791|gb|AW760890.1|AW760890
genomic: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgtt ... gattatgcagTTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAA
EST: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAG TTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAA
genomic: CTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgtt ... gattatgcagTTAGCCAGGAAAATTTGTGGATGCCTATTATTTTGTTGGTGAAGACCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTTGGTAGTGTTCTCTTTGGAGTCCTTGGCATGCCAATTGCAGCAGCTCTAAAGATGATCCCTGTGGGATCTGTCTGAAATCAATGCAGACAAATTAGgtacattgttgctcgttctctgttctcacacataaatcaagggtcttgtttgctcctagcctctttaaaaagatgcctattaaacctacaagagttttat
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -taaaaaga