1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagacttgtaacttcatgtcttttcttgtatctattatctattatctatgtagtatattataaaccttgctgcaattttttggcagttttatataa...
species | Glycine max |
transcript | GLYMA05G36850.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAG AAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTTEST: gi|19346907|gb|BM891795.1|BM891795
genomic: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagact ... taatgttcagAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTT
EST: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAG AAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTTEST: gi|298193906|gb|HO040554.1|HO040554
genomic: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagact ... taatgttcagAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTT
EST: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAGCAGGCCTCTGGAAAG AAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTTEST: gi|261497131|gb|GT185199.1|GT185199
genomic: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagact ... taatgttcagAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTT
EST: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAG AAAATTCCGCTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTT
genomic: GAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagact ... taatgttcagAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAATTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCTGTTTTGGAGATGGTAAACGCTTTTGAACAGGCCTCTGGAAAGgtaacagacttgtaacttcatgtcttttcttgtatctattatctattatctatgtagtatattataaaccttgctgcaattttttggcagttttatataa
- - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - GAGATG