1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacctgctttgatgatgcagtgtcctctctcaatattgctcaatttaatgtttgtaattcattggtattttatttggtaattgaacag
species | Glycine max |
transcript | GLYMA05G36600.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TG-CGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAG GGGTA-CCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCTEST: gi|192328339|gb|FK020050.1|FK020050
genomic: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacc ... aattgaacagGGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
EST: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAG GGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCTEST: gi|254318124|gb|GR832292.1|GR832292
genomic: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacc ... aattgaacagGGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
EST: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAG GGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCTEST: gi|254344090|gb|GR851000.1|GR851000
genomic: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacc ... aattgaacagGGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
EST: TG-CGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAG GGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCTEST: gi|254344089|gb|GR850999.1|GR850999
genomic: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacc ... aattgaacagGGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
EST: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAG GGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
genomic: TGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacc ... aattgaacagGGGTACCCCTCAAATTGAAGTGACCTTCGAAGTTGATGCCAACGGCATTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTGCTTGGGAAATTTGAACTGTCTGGAATTCCTCCAGCTCCAAGgtttattacctgctttgatgatgcagtgtcctctctcaatattgctcaatttaatgtttgtaattcattggtattttatttggtaattgaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC