1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGAGATGTTTATCCTATAGAACCATCAGATGGTTTTACAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtttgtagtggcttattgtccttaaatgtatccctttttcttgtttccttctaatacataatagatatacatacattatcttcatttgcagtt...
species | Glycine max |
transcript | GLYMA05G30130.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGAT ACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCTEST: gi|27446310|gb|CA953433.1|CA953433
genomic: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtt ... attccttcagACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
EST: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGAT ACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCTEST: gi|298188621|gb|HO035314.1|HO035314
genomic: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtt ... attccttcagACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
EST: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAGGAT ACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCTEST: gi|27427411|gb|CA938931.1|CA938931
genomic: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtt ... attccttcagACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
EST: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGAT ACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCTEST: gi|6725650|gb|AW310049.1|AW310049
genomic: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtt ... attccttcagACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
EST: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGAT ACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
genomic: CAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtt ... attccttcagACCAGTGGAATTCGATCACACACGTTATCCATGCTTGTGAACGATGCTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGATGTTTATCCTATAGAACCATCAGATGGTTTTACAGTCAATCAAGTTCTTGACGCTCACTGGGGTGTCCTCAATGATGAAGATgtaagtggtttgtagtggcttattgtccttaaatgtatccctttttcttgtttccttctaatacataatagatatacatacattatcttcatttgcagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA