1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATCCCGGAGTTGAAGAGATGGGATATGGCAGGCATCCAGCTCAAACTCATGGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactcattgctaattgactcaatcattgatcactttacagttcacaattgttaattactcttgtaaactgtatcaaatggttaattcactagtaa...
species | Glycine max |
transcript | GLYMA05G28140.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193469405|gb|FK437655.1|FK437655
genomic: GCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193350282|gb|FK318280.1|FK318280
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: ACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193357318|gb|FK323202.1|FK323202
genomic: ACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|208258785|gb|GE057122.1|GE057122
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193314540|gb|FK279291.1|FK279291
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|193578459|gb|FK534767.1|FK534767
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAAEST: gi|207776504|gb|GD747417.1|GD747417
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
EST: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGG GTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
genomic: GGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactc ... tcaagtgcagGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGCCCAAGCATGAGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCCGGAGTTGAAGAGATGGGATATGGCAGGCATCCAGCTCAAACTCATGGTGAAGCCCTCTTTCAACAAATGGAGTGTGAGCCAACGTTACAAATTGGgtatgcactcattgctaattgactcaatcattgatcactttacagttcacaattgttaattactcttgtaaactgtatcaaatggttaattcactagtaa
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC