1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCGGCAGGTTGGTTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAGgttggtgaaaatgctttttttgtatgatgtttgacaaattattcaaacatggtttctctattttgcatgatttgcaaacgaagaccaccaatttagttta...
species | Glycine max |
transcript | GLYMA05G21910.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAG GTCTTTGGCAACAAGCTCTTTTGATGGCCTCTGCTGCTTATAATCCTGTAGEST: gi|51337917|gb|CO981783.1|CO981783
genomic: TTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAGgttggtgaaa ... caccatgcagGTCTTTGGCAACAAGCTCTTTTGATGGCCTCTGCTGCTTATAATCCTGTAG
EST: TTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAG GTCTTTGGCAACAAGCTCEST: gi|207703187|gb|GD684377.1|GD684377
genomic: TTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAGgttggtgaaa ... caccatgcagGTCTTTGGCAACAAGCTC
EST: GGCAGCCGGCAG GTCTTTGGCAACAAGCTCTTTTGATGGCCTCTGCTGCTTATAATCCTGTAG
genomic: GGCAGCCGGCAGgttggtgaaa ... caccatgcagGTCTTTGGCAACAAGCTCTTTTGATGGCCTCTGCTGCTTATAATCCTGTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGGCAGGTTGGTTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAGgttggtgaaaatgctttttttgtatgatgtttgacaaattattcaaacatggtttctctattttgcatgatttgcaaacgaagaccaccaatttagttta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaccaa