1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTTTCTTTTCTGCTAATGCTGCTGCCTTGGCTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctcatcaggattttcaatttggtcttttacttgataaattttatttagaagaattcttaaaactgtttgttttattttcttag
species | Glycine max |
transcript | GLYMA04G30350.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCCEST: gi|207730170|gb|GD705014.1|GD705014
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCCEST: gi|208080756|gb|GD873290.1|GD873290
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCCEST: gi|14990789|gb|BI316462.1|BI316462
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCCEST: gi|208150386|gb|GD946959.1|GD946959
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCCEST: gi|208059894|gb|GD857406.1|GD857406
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
EST: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGCCCAAAAAGCC GCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
genomic: CTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctc ... attttcttagGCTGCTGCTCTGAAGGGCTCTGATCATCGGAGGGCCACAAATGTTAGTGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTCTTTTCTGCTAATGCTGCTGCCTTGGCTTCAAGGAAGTCCTCCCCAAGGGTGATAAATGAGGCTGTCCAAAAAGCCgtgagtgctcatcaggattttcaatttggtcttttacttgataaattttatttagaagaattcttaaaactgtttgttttattttcttag
- - - - - - - - - - - - - - - - - AAGGAA