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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCTTCAGCAGGAAGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCgtaaggccttgttcccttttcattacgatgtaattattgtcatattatatattctttacatgtttgattcatgttaactctactctcaataaattttcttcttttaatccaaaccaaaaaccattaatcatgaatgattttgtgtacttttacag

Basic information

species Glycine max
transcript GLYMA04G08600.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G08600.1 (Glycine max), 5'ss of exon 7
lower sequence: GRMZM2G077844_T03 (Zea mays), 5'ss of exon 7
GGGCTTCAGCAGGAAGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCgtaaggccttgttcccttttcattacgatgtaattattgtcatattatatattctttacatgtttgattcatgttaactctactctcaataaattttcttcttttaatccaaaccaaaaaccattaatcatgaatgattttgtgtacttttacag
|| ||   |||||| || ||||| ||  | ||||| ||||||||  |||||||||| ||||||||||| ||||| || ||||| ||||||| |  ||         ||||| | | || || ||     | |||||||       | |    | | |   ||| | |        ||||   |  | | |  ||   | | |||   | |                               
GGTCTAAGGCAGGAGGTCATTGTGGACCTTGTGGACCAATGTCGTTCATACAAGCAAAGAGTGGTGCAGCTTGTCAACTCAACATCgtaagtcactg---------cattatgttatactttttcaacgagtatatat-------acgaacaaatgaaaataattgt--------taaaacctagtatatggatatgagcgaaagggcct-------------------------------