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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGATAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAATgtgagtatcatgcacaggtactagatatcatatttatttaggaaagatgaggtaaaatctcatatttctgttatttgctttttgtctaaattattag

Basic information

species Glycine max
transcript GLYMA03G39570.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151402798|gb|EV272611.1|EV272611
EST:     TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
genomic: TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAATgtgagtatca ... aaattattagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
EST: gi|193348287|gb|FK309495.1|FK309495
EST:     TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
genomic: TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAATgtgagtatca ... aaattattagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
EST: gi|207726960|gb|GD702912.1|GD702912
EST:     ATTAACAGGGACAATTCTTGGTTAAACTACTTGCCAAACACACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
genomic: ATTAACAGGGACAA-TC-TGGTTAAACTACTTGCCAAACACACGGGAAATgtgagtatca ... aaattattagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
EST: gi|193336968|gb|FK302404.1|FK302404
EST:     TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA
genomic: TAATTAACAGGGACAATCTGGTTAAACTACTTGCCAAACACACGGGAAATgtgagtatca ... aaattattagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCGTATTATATGGATGCA