1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATTTATGAGAAGGTTGCTGCAGCATTTAACCTGGATAAAGATGTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacagtgacattttgatttatcttctatttaaactaggtggatatcatatttaagaaatgcatgtgcctaatttagaaaattttccaatacag
species | Glycine max |
transcript | GLYMA03G39130.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAA ATATGGTGTTAGTGGCTATCCTACACTGAAAGTTTT-CCCAAAGAGCAACEST: gi|192297309|gb|FG992403.1|FG992403
genomic: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCTACACTGAA-GTTTTTCCCAAAGAGCAAC
EST: GTAGTTATGGCCAATGTTGATGCTGACA-GTATAAAGATT-GGCTGAGAA ATATGGTGTTAGTGGCTATCCTACACTGAAGTTTT-CCCAA-GAGCAEST: gi|193361362|gb|FK325194.1|FK325194
genomic: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCA
EST: GTAGTTATGGCCAATGTTGATGCTGACAAGTATGAAGATTTGGCTGAGAA ATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAAEST: gi|192297310|gb|FG992404.1|FG992404
genomic: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAA
EST: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAA ATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAAEST: gi|193461347|gb|FK429292.1|FK429292
genomic: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAA
EST: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAA ATATGGTGTTAGTGGCTATCCTEST: gi|58023280|gb|CX710021.1|CX710021
genomic: GTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCT
EST: GATGCTGACAAGTATAAAGATTTGGCTGAGAA ATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAA
genomic: GATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacag ... tccaatacagATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTATGAGAAGGTTGCTGCAGCATTTAACCTGGATAAAGATGTAGTTATGGCCAATGTTGATGCTGACAAGTATAAAGATTTGGCTGAGAAgtgagtacagtgacattttgatttatcttctatttaaactaggtggatatcatatttaagaaatgcatgtgcctaatttagaaaattttccaatacag
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