1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtcattggtctatgcaggctctcttttatttctgtctccacttcatagctgactaattcagtggactgacattttttattgtgcaattttttctcacgcag
species | Glycine max |
transcript | GLYMA03G33910.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGEST: gi|7684823|gb|AW755471.1|AW755471
genomic: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGG
EST: AATTGCTACAAATCTGATCATTTGAAGAGACCAAGAAA-TTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACEST: gi|254342530|gb|GR858692.1|GR858692
genomic: AATTGCTACAAATCTGATCATTTGAAGAGACCA-GAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
EST: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACEST: gi|193359917|gb|FK324239.1|FK324239
genomic: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
EST: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACEST: gi|298189605|gb|HO038008.1|HO038008
genomic: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
EST: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACEST: gi|6482402|gb|AW201663.1|AW201663
genomic: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
EST: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAG TTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
genomic: AAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtc ... tctcacgcagTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGgtaccctgtcattggtctatgcaggctctcttttatttctgtctccacttcatagctgactaattcagtggactgacattttttattgtgcaattttttctcacgcag
- - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA