1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtcttatcactcttctctctctgttcccccctcctactttttttcttttttgatgaaatggtatctggcttcacttagtaatagtatttcaaatta...
species | Glycine max |
transcript | GLYMA02G42680.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTG AAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGCEST: gi|208056929|gb|GD854678.1|GD854678
genomic: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtctta ... gggattgcagAAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGC
EST: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTG AAACATTTGAGCTGGATATCAGCATCACAAAGAAEST: gi|214008127|gb|DB988500.1|DB988500
genomic: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtctta ... gggattgcagAAACATTTGAGCTGGATATCAGCATCACAAAGAA
EST: ACTTATTGGCATTAACAACCGTAATCTTG AAACAAAGGTGCTGGATATCAG-ATCCACAAAGAAGCTTCTTGAAGGAGAGEST: gi|209729118|gb|BW660015.1|BW660015
genomic: ACTTATTGGCATTAACAACCGTAATCTTGgtatgtctta ... gggattgcagAAACATTTGAGCTGGATATCAGCAT-CACAAAGAAGCTTCTTGAAGGAGAG
EST: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTG AAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGCEST: gi|209717560|gb|BW671482.1|BW671482
genomic: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtctta ... gggattgcagAAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGC
EST: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTG AAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGC
genomic: TCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtctta ... gggattgcagAAACATTTGAGCTGGATATCAGCATCACAAAGAAGCTTCTTGAAGGAGAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCATGATGAGAGGGAATTTGATCGTGTTCTTGCAATTGAGGGGATTGAACTTATTGGCATTAACAACCGTAATCTTGgtatgtcttatcactcttctctctctgttcccccctcctactttttttcttttttgatgaaatggtatctggcttcacttagtaatagtatttcaaatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttccccc