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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATCTGAAGAAGCAAAGTACTTGATACGTTCCTCTCGTTTCAGGAGAAGATCCGATTTCAAAGCTCCATTAATTAAAATTCCTGAGAGTTTTGAGAAAATgtgtgtattcgaactctatctctcttgttataatatatacatgcctttcgaagatatttattttctatttccatagtgttagaaagcgcacatttataccttcagattggcatatctatcgactatttcttctcacaattttattaatttaaagatacgttatttactgtttgcag

Basic information

species Glycine max
transcript GLYMA02G15070.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13125716|gb|BG316286.1|BG316286
EST:     TCCGATTTCAAAGCTCCATTAATTAAAATTCCTGAGAGTTTTGAGAAAAT                         AGTTGTTCACACCTTGACTCACAACTTTCGGAATGCTACCAGCATAGTGAG
genomic: TCCGATTTCAAAGCTCCATTAATTAAAATTCCTGAGAGTTTTGAGAAAATgtgtgtattc ... ctgtttgcagAGTTGTTCACACCTTGACTCACAACTTTCGGAATGCTACCAGCATAGTGAG
EST: gi|254330250|gb|GR841515.1|GR841515
EST:     TCCGATTTCAAAGCTCCATTAATTAAAATTCCTGAGAGTTTTGAGAAAAT                         AGTTGTTCACACCTTGACTCACAACTTTCGGAATGCTACCAGCATAGTGAG
genomic: TCCGATTTCAAAGCTCCATTAATTAAAATTCCTGAGAGTTTTGAGAAAATgtgtgtattc ... ctgtttgcagAGTTGTTCACACCTTGACTCACAACTTTCGGAATGCTACCAGCATAGTGAG