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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATCACCTGGATGATGCGCAGCAAAACAAGAACTTTACTTTTAAATGCCACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacaccatataatacccaagttacttaaatttattttctagttgtggatttgatattcttttatgtaatctaattttgtttgtgtctttgcattcag

Basic information

species Glycine max
transcript GLYMA02G13780.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6915623|gb|AW397153.1|AW397153
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacacc ... ttgcattcagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
EST: gi|58015700|gb|CX702442.1|CX702442
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacacc ... ttgcattcagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
EST: gi|42722614|gb|CK768513.1|CK768513
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacacc ... ttgcattcagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
EST: gi|58015403|gb|CX702145.1|CX702145
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacacc ... ttgcattcagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG