1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGTGATGATTGTCCTACATTGGTTTGCACGGACTTGGCTGCTAGGGGTCTAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCCgtgagcatcatatctattaatttatttagtggcctattgggtcactaagtatctcttccttctttctacctttcttgatattatttggttaaaaaatattcctttccctttctattttag
species | Glycine max |
transcript | GLYMA02G08550.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCC ATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAGEST: gi|12691439|gb|BG157775.1|BG157775
genomic: TAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCCgtgagcatca ... tctattttagATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAG
EST: CTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCC ATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAGEST: gi|209715159|gb|BW665634.1|BW665634
genomic: CTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCCgtgagcatca ... tctattttagATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAG
EST: CCTTGAATTCC ATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAGEST: gi|15814650|gb|BI786925.1|BI786925
genomic: CCTTGAATTCCgtgagcatca ... tctattttagATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAG
EST: TAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCC ATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAG
genomic: TAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCCgtgagcatca ... tctattttagATTGACTACCTTCATCGCACTGGTAGAACTGCTCGTATGGGTGCAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGATGATTGTCCTACATTGGTTTGCACGGACTTGGCTGCTAGGGGTCTAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAATTCCgtgagcatcatatctattaatttatttagtggcctattgggtcactaagtatctcttccttctttctacctttcttgatattatttggttaaaaaatattcctttccctttctattttag
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