1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGCTCTGTGGAAGATATGATGCTTCTAATGATGGTCAAGGCAACAGTCTGGAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctacatagctgttgttaactttaattgggtcacttattattgtcaagtagaaattgcttctgtggagcatgtcgtgcaggaaaatcaaataaat...
species | Glycine max |
transcript | GLYMA02G07160.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCCAGGAGACG AGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGCEST: gi|31311168|gb|CD396371.1|CD396371
genomic: TCCAGGAGACGgtaattctac ... gttcatgcagAGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
EST: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACG AGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGCEST: gi|27425473|gb|CA936993.1|CA936993
genomic: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctac ... gttcatgcagAGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
EST: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACG AGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGCEST: gi|10233075|gb|BE802020.1|BE802020
genomic: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctac ... gttcatgcagAGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
EST: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACG AGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGCEST: gi|192303510|gb|FG994488.1|FG994488
genomic: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctac ... gttcatgcagAGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
EST: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACG AGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
genomic: GAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctac ... gttcatgcagAGAAAGAGGTGCTCGAGCACTGGAAGAACGATTGGCTGCAGAGAGGTTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTCTGTGGAAGATATGATGCTTCTAATGATGGTCAAGGCAACAGTCTGGAAAGTGAGCCTTTACCAGGTTCGGACTCAATTGAGGCATCCAGGAGACGgtaattctacatagctgttgttaactttaattgggtcacttattattgtcaagtagaaattgcttctgtggagcatgtcgtgcaggaaaatcaaataaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA