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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTATGAGAGCACTGATAGCAGAATGAAAAGGGAGTTTGAGTCATATGGTGCAATCAAACGGgtaggtgttttgaatatcccaaagggattcagtaaggatatcgtatatgctaggctcttgatataatgtattttacttctatttgacatcttgacatgct...

Basic information

species Glycine max
transcript GLYMA02G06420.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G06420.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv04s0023g01580.t01 (Vitis vinifera), 5'ss of exon 6
AGTTATGAGAGCACTGATAGCAGAATGAAAAGGGAGTTTGAGTCATATGGTGCAATCAAACGGgtaggtgtttt-gaatatcccaaagggattcagtaaggatatcgtatatgctaggctcttgatataatgtattttacttctatttgacatcttgacatgct----
|  |||||||  ||||| |||||||| ||||||||||||||| | |||||  ||||||| |||||||||  ||| ||  ||||| ||| |      | ||| ||| |   |   | | ||   |  | |   |   |||| ||| | |    ||| |   |       
AACTATGAGACAACTGAGAGCAGAATCAAAAGGGAGTTTGAGGCTTATGGGCCAATCAAGCGGgtaggtactttagagcatccccaagtggggt--tcaggttattg---acttttgacttcggtaagaggttcagttacctctgtctattttctggtggtttctttc