1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGgtattcttttaacatgcaatcagtgtatccatccccctatcccctctctctttctttgttgatgaatgtcattttcacctctcgaaaataagaaaaatgcttctttctaactttatatcccttcctctttcacttctgaag
species | Glycine max |
transcript | GLYMA02G01510.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCTGAGTGCAGGGACAAAAG GAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGEST: gi|193464771|gb|FK430095.1|FK430095
genomic: GCTGAGTGCAGGGACAAAAGgtattctttt ... acttctgaagGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTG
EST: TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAG GAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGEST: gi|15204414|gb|BI427182.1|BI427182
genomic: TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGgtattctttt ... acttctgaagGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTG
EST: TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAG GAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTG
genomic: TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGgtattctttt ... acttctgaagGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGgtattcttttaacatgcaatcagtgtatccatccccctatcccctctctctttctttgttgatgaatgtcattttcacctctcgaaaataagaaaaatgcttctttctaactttatatcccttcctctttcacttctgaag
- - GGAGCT
- - GAGCTT