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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGGCCTTTGGAGCTAAACGCTGGGTAGCTACATTAGAAAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGgtatgtgatcgagtggagtgtgaatttgtttgtttccgattaatattaacatatatcctcaactcaaatatatgcatgcag

Basic information

species Glycine max
transcript GLYMA01G45070.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15203170|gb|BI425938.1|BI425938
EST:     ACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTG                         TGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAA
genomic: ACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGgtatgtgatc ... atgcatgcagTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAA
EST: gi|208249654|gb|GE048637.1|GE048637
EST:     ACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTG                         TGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGA
genomic: ACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGgtatgtgatc ... atgcatgcagTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGA