1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATCCTACTTATGTTGTTGCACCTGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattcttttctcctcccatacttggatattagaatcaattcacatctttcttattttcaagcattctagacgagttataattcttcatctatagat...
species | Glycine max |
transcript | GLYMA01G40650.4 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAGEST: gi|192317383|gb|FK007505.1|FK007505
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAGEST: gi|8283607|gb|BE021166.1|BE021166
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAGEST: gi|151400500|gb|EV270314.1|EV270314
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAGEST: gi|11274513|gb|BF324866.1|BF324866
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAGEST: gi|14991996|gb|BI317669.1|BI317669
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
EST: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAG CCTGGTATGAAAAACGGCAAATGNNNNNNNTCTATTCCCCACTTCTGGAAG
genomic: TGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattct ... tggtttgcagCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCTACTTATGTTGTTGCACCTGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGgttcgattcttttctcctcccatacttggatattagaatcaattcacatctttcttattttcaagcattctagacgagttataattcttcatctatagat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcctcc