1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtttttattttaaattctaaattctaattattagattgagtaattgagatctgcaagactgatcaaattgtttttgacttattatctcctgta...
species | Glycine max |
transcript | GLYMA01G34690.3 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GTTGCTTCTCAAGCTGTTTATTTCCTTGCATAAGACTTCAACAAGAGAT CATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTTEST: gi|208197916|gb|GD998031.1|GD998031
genomic: GTTGCTTCTCAAGCTGTTTA-TTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtt ... ctgattgcagCATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
EST: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGAT CATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTTEST: gi|193548510|gb|FK504943.1|FK504943
genomic: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtt ... ctgattgcagCATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
EST: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGAT CATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTTEST: gi|193549965|gb|FK505938.1|FK505938
genomic: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtt ... ctgattgcagCATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
EST: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAAAGAT CATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTTEST: gi|193490975|gb|FK455148.1|FK455148
genomic: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtt ... ctgattgcagCATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
EST: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGAT CACGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
genomic: GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtt ... ctgattgcagCATGTGAAACGAACAGCATTAAGGGATTTCAATGCTAGCAGTGCTGAAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTTCTCAAGCTGTTTATTCCTTGCATAAGACTTCAACAAGAGATgtaagtcgtttttattttaaattctaaattctaattattagattgagtaattgagatctgcaagactgatcaaattgtttttgacttattatctcctgta
- - - - CAAGCT
- - - - - AAGCTG
- - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - AAGAGA