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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATCACCTGGATGATGCACAGCAAAACAAGAATTTTACTTTTAAATGCCACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacatgatataatatcaaaattacttaaatgtattttcaagttgtggatttaatattcttttatgtaatcttattttgtttatgtctttgcatttag

Basic information

species Glycine max
transcript GLYMA01G09290.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8283090|gb|BE020651.1|BE020651
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacatg ... ttgcatttagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
EST: gi|46492909|gb|CN472465.1|CN472465
EST:     ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: ACAGAGAGAACAATGAGATATATTCAGTCAACTCCTTAAATTTCCATCCGgtagtacatg ... ttgcatttagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
EST: gi|193421209|gb|FK389172.1|FK389172
EST:     AAATTTCCATCCG                         GTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG
genomic: AAATTTCCATCCGgtagtacatg ... ttgcatttagGTACATCACACTTTTGCAACTGCTGGATCTGATGGTGCTTTTAATTTCTGG