Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTATTTGGCAAATTTGCGTCTTAGAGGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAAgtaagttttacaatatcattttcaagacaataagctattctcacaattgtcttgcaattggtctctaattcaagttttgacttattggttgagttctatt...

Basic information

species Glycine max
transcript GLYMA01G05430.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192326836|gb|FK015108.1|FK015108
EST:     GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAA                         CCCTTTGAGTGAAAGTGCAGACACAGTTGGT
genomic: GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAAgtaagtttta ... atatctgcagCCCTTTGAGTGAAAGTGCAGACACAGTTGGT
EST: gi|7232488|gb|AW567843.1|AW567843
EST:     GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAA                         CCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC
genomic: GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAAgtaagtttta ... atatctgcagCCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC
EST: gi|23731154|gb|BU763684.1|BU763684
EST:     AGTCTCTGCATATGAGCCCATTGTTATAAA                         CCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC
genomic: AGTCTCTGCATATGAGCCCATTGTTATAAAgtaagtttta ... atatctgcagCCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC
EST: gi|298182312|gb|HO026487.1|HO026487
EST:     GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAA                         CCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC
genomic: GGAGTTGATACTGATGTACTAGTCTCTGCATATGAGCCCATTGTTATAAAgtaagtttta ... atatctgcagCCCTTTGAGTGAAAGTGCAGACACAGTTGGTGCTGGTGTAGCTGTTCCAGC