1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGGTGAAATTGTAAGGAGAGTTTTGTTGAAGTTGGCTGAAGAAGTTGACTTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaatttatgcaaccaaacatttactcattgtctctgattgtacttgttaatttgccatctggccttattttagaaatttcttgtacttttttac...
species | Glycine max |
transcript | GLYMA01G01060.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGATTTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGTEST: gi|58023160|gb|CX709901.1|CX709901
genomic: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
EST: GAGAATTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGTEST: gi|16348134|gb|BI973729.1|BI973729
genomic: GAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
EST: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGTEST: gi|58021445|gb|CX708186.1|CX708186
genomic: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
EST: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGTEST: gi|58017593|gb|CX704335.1|CX704335
genomic: TTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
EST: GGAGATACTG-TCCTTCCAAAATTGAGAATTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGTEST: gi|58015190|gb|CX701932.1|CX701932
genomic: GGAGATACTGTTCC-TCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
EST: GGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAG GACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
genomic: GGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaat ... tgatgtatagGACACCTGACATGTCTGCAATACATCAAGATACATCTTCAGATCTGAAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGTGAAATTGTAAGGAGAGTTTTGTTGAAGTTGGCTGAAGAAGTTGACTTCTTTGGAGATACTGTTCCTCCAAAATTGAGAATTCCTTTCGTACTTAGgtatgacaatttatgcaaccaaacatttactcattgtctctgattgtacttgttaatttgccatctggccttattttagaaatttcttgtacttttttac
- - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT