1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTAAATGTTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAAgtaagttaagctatgcaaaccacttcaatcttactttatagttttttttcttataaattacacttcttttcccttcaaatatgaaaatgtctaaaaatga...
species | Glycine max |
transcript | GLYMA19G37940.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAA GTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAEST: gi|16347007|gb|BI972602.1|BI972602
genomic: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAAgtaagttaag ... tttcatatagGTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAA
EST: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAA GTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAEST: gi|5677296|gb|AI938426.1|AI938426
genomic: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAAgtaagttaag ... tttcatatagGTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAA
EST: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAA GTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAA
genomic: CTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAAgtaagttaag ... tttcatatagGTAAGCATAACATTAATCGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAAATGTTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTGCTAATTTAATATTTGGGGCAGTAATAGATCCATCACTCAGTGGGCAAgtaagttaagctatgcaaaccacttcaatcttactttatagttttttttcttataaattacacttcttttcccttcaaatatgaaaatgtctaaaaatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcccttc