1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTATCAAATTGATGATGGAGGAGGTGCCTTTTATGGGCCAAAGGTTGATATCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattctttactcataatttgttcctatataaaagcacttatttgccttcatctaatagctttaggtttgaagagattcagtcttgaatggatgacatg...
species | Glycine max |
transcript | GLYMA19G37550.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAATEST: gi|7691979|gb|AW760095.1|AW760095
genomic: CAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAAT
EST: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCANATEST: gi|7925049|gb|AW831075.1|AW831075
genomic: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAAT
EST: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAATEST: gi|7924875|gb|AW830901.1|AW830901
genomic: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAAT
EST: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAATEST: gi|23064215|gb|BU578988.1|BU578988
genomic: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAAT
EST: TGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAATEST: gi|16349556|gb|BI975151.1|BI975151
genomic: TGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCAAAT
EST: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAG GTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCA
genomic: TCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattcttt ... taacttacagGTTGATTTCAATCTACCACAGCGTTTTGACATCACATATGTTGACTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATCAAATTGATGATGGAGGAGGTGCCTTTTATGGGCCAAAGGTTGATATCAAGATTGAGGATGCTCTTGGTAGGAAGTGGCAATGCTCAACCATACAGgcaattctttactcataatttgttcctatataaaagcacttatttgccttcatctaatagctttaggtttgaagagattcagtcttgaatggatgacatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG