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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGTTAGCTGCTGCTAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAGgtatgacttgaaattttagtttgctgcagtagttctggttatctcaattttattactattgaaaccatggctaggtcataaatatgataaactatataatatttttgcag

Basic information

species Glycine max
transcript GLYMA19G37230.2
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151403740|gb|EV273550.1|EV273550
EST:     AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAG                         AGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
genomic: AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAGgtatgacttg ... atttttgcagAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
EST: gi|254332261|gb|GR843845.1|GR843845
EST:     GACATG-TGAAATTGAATTCCGCAGCATCCCTTTCTCCAAAGGATTCAAG                         AGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
genomic: GACATGTTGAAATTGAATTCCGCAGCATCCC-TTCTCCAAAGGATTCAAGgtatgacttg ... atttttgcagAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
EST: gi|151404632|gb|EV274446.1|EV274446
EST:     AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAG                         AGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
genomic: AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAGgtatgacttg ... atttttgcagAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
EST: gi|254332260|gb|GR843844.1|GR843844
EST:     AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAG                         AGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
genomic: AGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAGgtatgacttg ... atttttgcagAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC
EST: gi|22927629|gb|BU544768.1|BU544768
EST:     TCCAAAGGATTCAAG                         AGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAANCTCC
genomic: TCCAAAGGATTCAAGgtatgacttg ... atttttgcagAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCC