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GATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGgtaggcaaccctatttctttttcacagtatctatgtagtgtctattcaccatgtaagctaaagagatacacttgaaccattttcttttcctccttagttt...
species | Glycine max |
transcript | GLYMA18G52160.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAG ATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATEST: gi|208082323|gb|GD883857.1|GD883857
genomic: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGgtaggcaacc ... ctcattgcagATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
EST: CTGGGGAAAAG ATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATEST: gi|208238132|gb|GE040452.1|GE040452
genomic: CTGGGGAAAAGgtaggcaacc ... ctcattgcagATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
EST: GCTGGGGAAAAG ATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATEST: gi|6070794|gb|AW100181.1|AW100181
genomic: GCTGGGGAAAAGgtaggcaacc ... ctcattgcagATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
EST: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAG ATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATEST: gi|21677449|gb|BQ629800.1|BQ629800
genomic: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGgtaggcaacc ... ctcattgcagATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
EST: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAG ATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
genomic: GTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGgtaggcaacc ... ctcattgcagATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGgtaggcaaccctatttctttttcacagtatctatgtagtgtctattcaccatgtaagctaaagagatacacttgaaccattttcttttcctccttagttt
- - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcctcc