1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGTGTATGGCGTGTTGGTCTTTGAGGCAATGGCCACATTTATAGGCCAAGTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgctttctcatgattttagtacctggtcatgtcagtttggaccattttacagcgcctaacattaataagtcccatgtgaaaaaacaaccacca...
species | Glycine max |
transcript | GLYMA18G46240.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCAT GATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATTEST: gi|207844712|gb|GD816633.1|GD816633
genomic: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgc ... ttttgtcacaGATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATT
EST: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCAT GATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATTEST: gi|193720084|gb|FK650496.1|FK650496
genomic: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgc ... ttttgtcacaGATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATT
EST: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCAT GATAACAACGGCAAGAAAAGGCAGTGACATTGCTATTGTCATACTTGATATEST: gi|208169932|gb|GD970063.1|GD970063
genomic: GTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgc ... ttttgtcacaGATAACAACGGCAAG-AAAGGCAGTGACATTGCTATTGTCATACTTGATAT
EST: TTTGGTGCTGCCACCACAGCCAT GATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATTEST: gi|193707689|gb|FK647247.1|FK647247
genomic: TTTGGTGCTGCCACCACAGCCATggtaatttgc ... ttttgtcacaGATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATT
EST: CTGTCCTTTCTTCCCTTCATTGCTATCTTTGGTGCTGCCACCACAGCCAT GATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATT
genomic: CTGTCC--TC-TCCC-TCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgc ... ttttgtcacaGATAACAACGGCAAGAAAGGCAGTGACATTGCTATTGTCATACTTGATATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGTATGGCGTGTTGGTCTTTGAGGCAATGGCCACATTTATAGGCCAAGTTTCTGTCCTCTCCCTCATTGCTATCTTTGGTGCTGCCACCACAGCCATggtaatttgctttctcatgattttagtacctggtcatgtcagtttggaccattttacagcgcctaacattaataagtcccatgtgaaaaaacaaccacca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgaaaaaa