Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTGATGTATTTTTAATTTGCTCAAATGCAATGCAGTACAATGCACCGGAGACTATATACCACAAACAGgtataaagctcaatgcttccctgtgttccctcccaacaaacgtgatatcaataattgttttattgtgcttactgtctgtcccctatatttgtcacag

Basic information

species Glycine max
transcript GLYMA18G10850.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA18G10850.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv19s0090g00610.t01 (Vitis vinifera), 5'ss of exon 6
AGTGATGTATTTTTAATTTGCTCAAATGCAATGCAGTACAATGCACCGGAGACTATATACCACAAACAGgtataaagctcaatgcttccctgtgttccctcccaacaaacgtgatatcaataattgttttattg-tgcttactgtctgtcccctatatttgtcacag-
||||| || ||| | |||||| | ||||||||||| |||||||| || || || |||||||| ||||||||| || |||    ||  |  | | ||      |  |||  |   |     |    | ||  | | |  ||| |||   | |   |   |  |   |  
AGTGACGTTTTTCTGATTTGCACCAATGCAATGCAATACAATGCCCCAGATACCATATACCATAAACAGgtacaaggcttttggcccctttattttaatcatcttcaattgcttttgttttgcgggcttagtcggtatttaatgttattactaaactataatggaaag