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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAGAACGCATTTGTAACAGgtaaatcttagcagtttaaaagtagttaagtggagcaatgactgaaaacagtagttaactacataaccactgcttcaggattcttgaaatgtgacaaaaa...

Basic information

species Glycine max
transcript GLYMA18G02850.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA18G02850.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv13s0067g01550.t01 (Vitis vinifera), 5'ss of exon 6
TCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAGAACGCATTTGTAACAGgtaaatcttagcagtttaaaagtagttaagtggagcaatgactgaaaacagtagt--taactacataaccactgctt-caggattcttgaaatgtgacaaaaa
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TGCATTATTTGCATATATCTCTTTAGAACCAATAAAGTGGCCACTGTTAAACCTTGGGCCACAGGATTAAGTGGGCAGCTTCAGAAGGTCTTTGTAACCGgtaattgttccaaccccctcttctgttccctgtat--attgctcatgttcgtattaatggttctgtgccttatgtatgcatgacctgatatctgcatttcag-