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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCAGATGTTCTAGGTCAATTCATGCCTTTAGTAGGAATCGATTGGTCACAGACAGGAGTTGCTCATTTATTCTCAGATATCAAGgtttgtccaccttgcgcgtgtgtttaggtgttttgagattactacaacatgaaaatagaatgttctgtagttaaatcttgaatacattgattacacatca...

Basic information

species Glycine max
transcript GLYMA17G36130.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G36130.1 (Glycine max), 5'ss of exon 6
lower sequence: Vv18s0001g10680.t01 (Vitis vinifera), 5'ss of exon 7
GTCAGATGTTCTAGGTCAATTCATGCCTTTAGTAGGAATCGATTGGTCACAGACAGGAGTTGCTCATTTATTCTCAGATATCAAGgtttgtccaccttgcgcgtgtgtttaggtgttttg--agattactacaacatgaaaatagaatgttctgtagttaaatcttgaatacattgattacacatca
||||||||||||||| || ||||||||| | || ||| | ||||||||||||||||| || || ||| |||| || | ||| |||||||||     || | | | ||||    |  || |  | |||   | | ||||   ||    |         ||  || ||| | |  |   |      |  
GTCAGATGTTCTAGGGCAGTTCATGCCTATGGTTGGAGTAGATTGGTCACAGACAGGTGTAGCACATCTATTTTCTGCTATTAAGgtttgttgtgtttcctcatatgttcttataattaggaaaattttcaaatcatgtttatcacttaaggaagtattttatattgcaaatttccttctttagt--