1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGTTGTGTCTCTAAGCTTATGCTCTCGAAAAGACTGCTTTATATCTGGATCTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcacatgcatgcaatttcttgtttattcaatatccttttgtttattatacttaatatgaattttttacgggcttcttactttaaaaataaatag
species | Glycine max |
transcript | GLYMA17G33900.4 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGGEST: gi|13181633|gb|BG352973.1|BG352973
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAAGGEST: gi|10848221|gb|BF070764.1|BF070764
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGGEST: gi|19348126|gb|BM892658.1|BM892658
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGGEST: gi|19270294|gb|BM886550.1|BM886550
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGGEST: gi|10231314|gb|BE800202.1|BE800202
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
EST: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAG GGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
genomic: CTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcac ... aaataaatagGGACTTTTACATGTACAAGGAAGACCTGCTATATCATATGATGATCCAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTGTGTCTCTAAGCTTATGCTCTCGAAAAGACTGCTTTATATCTGGATCTCTAGATCGAACTGTTTTACTGTGGGATCAAAGGGCTGAGAAGTGCCAGgtagtggcacatgcatgcaatttcttgtttattcaatatccttttgtttattatacttaatatgaattttttacgggcttcttactttaaaaataaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT