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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatcttcatctgatgtgttagttttagtgaatgcacaatgatgatgatctctgggaaacagagtgtggttcaatagctatatttttataatgtac...

Basic information

species Glycine max
transcript GLYMA17G26900.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151401073|gb|EV270887.1|EV270887
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|14259240|gb|BG882148.1|BG882148
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTC
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTC
EST: gi|151412705|gb|EV282517.1|EV282517
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|298190184|gb|HO032305.1|HO032305
EST:     TGCAGTTGGAAAGCCTGCTGACAAAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|151396592|gb|EV266469.1|EV266469
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|254342909|gb|GR859071.1|GR859071
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|23064041|gb|BU578814.1|BU578814
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCT
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCT
EST: gi|207845484|gb|GD814073.1|GD814073
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCAC
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCAC
EST: gi|11687742|gb|BF595418.1|BF595418
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGC
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGC
EST: gi|151402880|gb|EV272693.1|EV272693
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|27424702|gb|CA936222.1|CA936222
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATT
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATT
EST: gi|254342910|gb|GR859072.1|GR859072
EST:     TGCAGTT-GAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAG
EST: gi|11412862|gb|BF424873.1|BF424873
EST:     TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTG                         GTGGAATTCCGTTCTTCATATTCACCTGCTTGC
genomic: TGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGgtgggtatct ... gagttggcagGTGGAATTCCGTTCTTCATATTCACCTGCTTGC